Hello there,
Our environment looks like:
- jdk1.8.0_101
- pgx-2.4.1
- Using PGX Shared Memory Server
The graph is being correctly loaded in session:
11:47:30,540 INFO ControlEndpoint - Get Pgx configuration
11:47:30,653 DEBUG CsrfTokenValidator - received content type application/json; charset=UTF-8
11:47:30,673 INFO Server - start task CREATE_SESSION
11:47:30,674 DEBUG Task - submit CREATE_SESSION to server-thread
11:47:30,674 DEBUG Task - internal queue START ====> CREATE_SESSION
11:47:30,674 DEBUG CoreSessionImpl$1 - addSession 2017-09-12T15:47:23.977Z [client from remote address XXXX] [idleTimeout=null,taskTimeout=null,unit=null]
11:47:30,676 DEBUG Task - internal queue FINISHED => CREATE_SESSION: total task exec time = 2 ms (0 secs)
11:47:30,736 DEBUG CsrfTokenValidator - received content type application/json; charset=UTF-8
11:47:30,786 INFO CoreEndpoint - create graph {"graphConfig":{"format":"adj_list","vertex_uris":["file:///root/zenodo-filescript/output-lurodrig.txt"],"vertex_id_type":"string","vertex_props":[{"type":"string","name":"url"},{"type":"string","name":"type"}],"separator":","},"graphName":null,"_csrf_token":"XXXXXXXXXXX"}
11:47:34,202 DEBUG StopWatch - Loading Graph - create graph : 95 (2%)
11:47:34,202 DEBUG StopWatch - Loading Graph - (total) : 3371
11:47:34,203 INFO PersistenceManager - loaded data-source version 1505227236000: N = 231017 E = 644547 est. memory (MB) = 20
11:47:34,204 DEBUG Task - task READ_GRAPH unlocks (WRITE) session
11:47:34,205 DEBUG Task - XXXXXXXX FINISHED => READ_GRAPH: total task exec time = 3396 ms (3 secs)
The problem arises when we try to make a request through the JAVA API. In the logs of our client I can see something like this:
1060415 [qtp1794568502-58] DEBUG oracle.pgx.client.RemoteUtils - create session cookie (session ID = xxxxx)
1060415 [qtp1794568502-58] DEBUG oracle.pgx.client.RemoteUtils - create csrf token cookie (token = xxxxxxxx)
1060416 [qtp1794568502-58] DEBUG oracle.pgx.client.RemoteUtils - Requesting POST http://@PGXSERVER.cern.ch:XXXX/core/graph/output-lurodrig/clone//@PGXSERVER.cern.ch:XXXX/core/graph/output-lurodrig/clone HTTP/1.1 with payload {"nodePropNames":null,"edgePropNames":null,"newGraphName":null,"_csrf_token":"XXXXXXX"}
1060416 [qtp1794568502-58] DEBUG org.apache.http.client.protocol.RequestAddCookies - CookieSpec selected: best-match
1060416 [qtp1794568502-58] DEBUG org.apache.http.client.protocol.RequestAddCookies - Cookie [version: 0][name: SID][value: XXXXXXXX][domain: PGXSERVER.cern.ch][path: null][expiry: null] match PGXSERVER.cern.ch:XXXXX/core/graph/output-lurodrig/clone]
1060416 [qtp1794568502-58] DEBUG org.apache.http.client.protocol.RequestAddCookies - Cookie [version: 0][name: _csrf_token][value: XXXXXXXX][domain: PGXSERVER.cern.ch][path: null][expiry: null] match [PGXSERVER.cern.ch:XXXX/core/graph/output-lurodrig/clone]
1060418 [qtp1794568502-58] DEBUG org.apache.http.impl.execchain.MainClientExec - Target auth state: UNCHALLENGED
1060418 [qtp1794568502-58] DEBUG org.apache.http.impl.execchain.MainClientExec - Proxy auth state: UNCHALLENGED
1060418 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 >> POST /core/graph/output-lurodrig/clone HTTP/1.1
1060418 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 >> Content-Length: 116
1060418 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 >> Content-Type: application/json; charset=UTF-8
1060418 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 >> Host: PGXSERVER.cern.ch:XXXXX
1060418 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 >> Connection: Keep-Alive
1060418 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 >> User-Agent: Apache-HttpClient/4.3.6 (java 1.5)
1060418 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 >> Cookie: SID=XXXXXXXX; _csrf_token=XXXXXXXX
1060418 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 >> Cookie2: $Version=1
1060418 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 >> Accept-Encoding: gzip,deflate
1060418 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 >> "POST /core/graph/output-lurodrig/clone HTTP/1.1[\r][\n]"
1060418 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 >> "Content-Length: 116[\r][\n]"
1060418 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 >> "Content-Type: application/json; charset=UTF-8[\r][\n]"
1060418 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 >> "Host:PGXSERVER.cern.ch:XXXXX[\r][\n]"
1060418 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 >> "Connection: Keep-Alive[\r][\n]"
1060418 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 >> "User-Agent: Apache-HttpClient/4.3.6 (java 1.5)[\r][\n]"
1060418 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 >> "Cookie: SID=XXXXXXXXX; _csrf_token=XXXXXX[\r][\n]"
1060418 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 >> "Cookie2: $Version=1[\r][\n]"
1060418 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 >> "Accept-Encoding: gzip,deflate[\r][\n]"
1060418 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 >> "[\r][\n]"
1060418 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 >> "{"nodePropNames":null,"edgePropNames":null,"newGraphName":null,"_csrf_token":"XXXXXXXXXXX"}"
1060440 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 << "HTTP/1.1 201 Created[\r][\n]"
1060440 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 << "Server: Apache-Coyote/1.1[\r][\n]"
1060440 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 << "Content-Type: application/json;charset=utf-8[\r][\n]"
1060440 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 << "Content-Length: 51[\r][\n]"
1060440 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 << "Date: Tue, 12 Sep 2017 16:05:10 GMT[\r][\n]"
1060440 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 << "[\r][\n]"
1060440 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 << HTTP/1.1 201 Created
1060440 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 << Server: Apache-Coyote/1.1
1060440 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 << Content-Type: application/json;charset=utf-8
1060440 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 << Content-Length: 51
1060440 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 << Date: Tue, 12 Sep 2017 16:05:10 GMT
1060441 [qtp1794568502-58] DEBUG org.apache.http.impl.execchain.MainClientExec - Connection can be kept alive indefinitely
1060441 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 << "{"futureId":"185e1d53-a9ec-4893-aed9-bb1ad7cfa372"}"
1060441 [qtp1794568502-58] DEBUG org.apache.http.impl.conn.PoolingHttpClientConnectionManager - Connection [id: 2][route: {}->http://PGXSERVER.cern.ch:XXXXX] can be kept alive indefinitely
1060441 [qtp1794568502-58] DEBUG org.apache.http.impl.conn.PoolingHttpClientConnectionManager - Connection released: [id: 2][route: {}->http://PGXSERVER.cern.ch:XXXXX][total kept alive: 1; route allocated: 1 of 2; total allocated: 1 of 20]
1060441 [qtp1794568502-58] DEBUG oracle.pgx.client.RemoteUtils - received HTTP status 201
1060441 [qtp1794568502-58] DEBUG oracle.pgx.client.RemoteUtils - {"futureId":"185e1d53-a9ec-4893-aed9-bb1ad7cfa372"}
1060441 [pgx-client-thread-3] DEBUG oracle.pgx.client.PgxRemoteFuture - Requesting GET http://@PGXSERVER.cern.ch:XXXXX/future/core/185e1d53-a9ec-4893-aed9-bb1ad7cfa372//@PGXSERVER.cern.ch:XXXXX/future/core/185e1d53-a9ec-4893-aed9-bb1ad7cfa372 HTTP/1.1
1060442 [pgx-client-thread-3] DEBUG org.apache.http.client.protocol.RequestAddCookies - CookieSpec selected: best-match
1060442 [pgx-client-thread-3] DEBUG org.apache.http.client.protocol.RequestAddCookies - Cookie [version: 0][name: SID][value: XXXXXXXXX][domain:PGXSERVER.cern.ch][path: null][expiry: null] match PGXSERVER.cern.ch:XXXX/future/core/185e1d53-a9ec-4893-aed9-bb1ad7cfa372]
1060442 [pgx-client-thread-3] DEBUG org.apache.http.client.protocol.RequestAddCookies - Cookie [version: 0][name: _csrf_token][value:XXXXXXXX][domain: PGXSERVER.cern.ch][path: null][expiry: null] match [PGXSERVER.cern.ch:XXXX/future/core/185e1d53-a9ec-4893-aed9-bb1ad7cfa372]
1060442 [pgx-client-thread-3] DEBUG org.apache.http.impl.conn.PoolingHttpClientConnectionManager - Connection request: [route: {}->http://PGXSERVER.cern.ch:XXXXX7][total kept alive: 1; route allocated: 1 of 2; total allocated: 1 of 20]
1060442 [pgx-client-thread-3] DEBUG org.apache.http.impl.conn.PoolingHttpClientConnectionManager - Connection leased: [id: 2][route: {}->http://PGXSERVER.cern.ch:XXXX][total kept alive: 0; route allocated: 1 of 2; total allocated: 1 of 20]
1060442 [pgx-client-thread-3] DEBUG org.apache.http.impl.execchain.MainClientExec - Stale connection check
1060443 [pgx-client-thread-3] DEBUG org.apache.http.wire - http-outgoing-2 << "[read] I/O error: Read timed out"
1060443 [pgx-client-thread-3] DEBUG org.apache.http.impl.execchain.MainClientExec - Executing request GET /future/core/185e1d53-a9ec-4893-aed9-bb1ad7cfa372 HTTP/1.1
1060443 [pgx-client-thread-3] DEBUG org.apache.http.impl.execchain.MainClientExec - Target auth state: UNCHALLENGED
1060443 [pgx-client-thread-3] DEBUG org.apache.http.impl.execchain.MainClientExec - Proxy auth state: UNCHALLENGED
1060444 [pgx-client-thread-3] DEBUG org.apache.http.headers - http-outgoing-2 >> GET /future/core/185e1d53-a9ec-4893-aed9-bb1ad7cfa372 HTTP/1.1
1060444 [pgx-client-thread-3] DEBUG org.apache.http.headers - http-outgoing-2 >> Host: PGXSERVER.cern.ch:XXXX
1060444 [pgx-client-thread-3] DEBUG org.apache.http.headers - http-outgoing-2 >> Connection: Keep-Alive
1060444 [pgx-client-thread-3] DEBUG org.apache.http.headers - http-outgoing-2 >> User-Agent: Apache-HttpClient/4.3.6 (java 1.5)
1060444 [pgx-client-thread-3] DEBUG org.apache.http.headers - http-outgoing-2 >> Cookie: SID=XXXXXXX; _csrf_token=XXXXXXXXX
1060444 [pgx-client-thread-3] DEBUG org.apache.http.headers - http-outgoing-2 >> Cookie2: $Version=1
1060444 [pgx-client-thread-3] DEBUG org.apache.http.headers - http-outgoing-2 >> Accept-Encoding: gzip,deflate
1060444 [pgx-client-thread-3] DEBUG org.apache.http.wire - http-outgoing-2 >> "GET /future/core/185e1d53-a9ec-4893-aed9-bb1ad7cfa372 HTTP/1.1[\r][\n]"
1060444 [pgx-client-thread-3] DEBUG org.apache.http.wire - http-outgoing-2 >> "Host: PGXSERVER.cern.ch:XXXXX[\r][\n]"
1060444 [pgx-client-thread-3] DEBUG org.apache.http.wire - http-outgoing-2 >> "Connection: Keep-Alive[\r][\n]"
1060444 [pgx-client-thread-3] DEBUG org.apache.http.wire - http-outgoing-2 >> "User-Agent: Apache-HttpClient/4.3.6 (java 1.5)[\r][\n]"
1060444 [pgx-client-thread-3] DEBUG org.apache.http.wire - http-outgoing-2 >> "Cookie: SID=XXXXXXXXX; _csrf_token=XXXXXXXXX[\r][\n]"
1060444 [pgx-client-thread-3] DEBUG org.apache.http.wire - http-outgoing-2 >> "Cookie2: $Version=1[\r][\n]"
1060444 [pgx-client-thread-3] DEBUG org.apache.http.wire - http-outgoing-2 >> "Accept-Encoding: gzip,deflate[\r][\n]"
1060444 [pgx-client-thread-3] DEBUG org.apache.http.wire - http-outgoing-2 >> "[\r][\n]"
1060657 [pgx-client-thread-3] DEBUG org.apache.http.wire - http-outgoing-2 << "HTTP/1.1 200 OK[\r][\n]"
1060657 [pgx-client-thread-3] DEBUG org.apache.http.wire - http-outgoing-2 << "Server: Apache-Coyote/1.1[\r][\n]"
1060657 [pgx-client-thread-3] DEBUG org.apache.http.wire - http-outgoing-2 << "Content-Type: application/json;charset=utf-8[\r][\n]"
1060657 [pgx-client-thread-3] DEBUG org.apache.http.wire - http-outgoing-2 << "Content-Length: 568[\r][\n]"
1060657 [pgx-client-thread-3] DEBUG org.apache.http.wire - http-outgoing-2 << "Date: Tue, 12 Sep 2017 16:05:10 GMT[\r][\n]"
1060657 [pgx-client-thread-3] DEBUG org.apache.http.wire - http-outgoing-2 << "[\r][\n]"
1060658 [pgx-client-thread-3] DEBUG org.apache.http.headers - http-outgoing-2 << HTTP/1.1 200 OK
1060658 [pgx-client-thread-3] DEBUG org.apache.http.headers - http-outgoing-2 << Server: Apache-Coyote/1.1
1060658 [pgx-client-thread-3] DEBUG org.apache.http.headers - http-outgoing-2 << Content-Type: application/json;charset=utf-8
1060658 [pgx-client-thread-3] DEBUG org.apache.http.headers - http-outgoing-2 << Content-Length: 568
1060658 [pgx-client-thread-3] DEBUG org.apache.http.headers - http-outgoing-2 << Date: Tue, 12 Sep 2017 16:05:10 GMT
1060658 [pgx-client-thread-3] DEBUG org.apache.http.impl.execchain.MainClientExec - Connection can be kept alive indefinitely
1060658 [pgx-client-thread-3] DEBUG org.apache.http.wire - http-outgoing-2 << "{"graphName":"output-lurodrig_sub-graph_1","vertexLabels":null,"edgeLabel":null,"metaData":{"numVertices":231017,"numEdges":644547,"memoryMb":23,"dataSourceVersion":null,"config":null,"creationRequestTimestamp":1505232310458,"creationTimestamp":1505232310666,"vertexIdType":"string","edgeIdType":"long","directed":true},"ageMs":0,"nodeProperties":{"type":{"dimension":0,"name":"type","entityType":"vertex","type":"string","transient":true},"url":{"dimension":0,"name":"url","entityType":"vertex","type":"string","transient":true}},"edgeProperties":{},"transient":true}"
1060658 [pgx-client-thread-3] DEBUG org.apache.http.impl.conn.PoolingHttpClientConnectionManager - Connection [id: 2][route: {}->http://PGXSERVER.cern.ch:XXXX] can be kept alive indefinitely
1060658 [pgx-client-thread-3] DEBUG org.apache.http.impl.conn.PoolingHttpClientConnectionManager - Connection released: [id: 2][route: {}->http://PGXSERVER.cern.ch:XXXX][total kept alive: 1; route allocated: 1 of 2; total allocated: 1 of 20]
1060658 [pgx-client-thread-3] DEBUG oracle.pgx.client.RemoteUtils - received HTTP status 200
1060658 [pgx-client-thread-3] DEBUG oracle.pgx.client.RemoteUtils - {"graphName":"output-lurodrig_sub-graph_1","vertexLabels":null,"edgeLabel":null,"metaData":{"numVertices":231017,"numEdges":644547,"memoryMb":23,"dataSourceVersion":null,"config":null,"creationRequestTimestamp":1505232310458,"creationTimestamp":1505232310666,"vertexIdType":"string","edgeIdType":"long","directed":true},"ageMs":0,"nodeProperties":{"type":{"dimension":0,"name":"type","entityType":"vertex","type":"string","transient":true},"url":{"dimension":0,"name":"url","entityType":"vertex","type":"string","transient":true}},"edgeProperties":{},"transient":true}
1060670 [qtp1794568502-58] DEBUG oracle.pgx.client.RemoteUtils - create session cookie (session ID = XXXXXXXX)
1060670 [qtp1794568502-58] DEBUG oracle.pgx.client.RemoteUtils - create csrf token cookie (token = XXXXXXXXX)
1060671 [qtp1794568502-58] DEBUG oracle.pgx.client.RemoteUtils - Requesting POST http://@PGXSERVER.cern.ch:XXXX/core/graph/output-lurodrig_sub-graph_1/query//@PGXSERVER.cern.ch:XXXX/core/graph/output-lurodrig_sub-graph_1/query HTTP/1.1 with payload {"pgqlQuery":"SELECT x WHERE (x WITH type='keyword' AND id() = 'electron')","semantic":null,"_csrf_token":"XXXXXXXXX"}
1060671 [qtp1794568502-58] DEBUG org.apache.http.client.protocol.RequestAddCookies - CookieSpec selected: best-match
1060671 [qtp1794568502-58] DEBUG org.apache.http.client.protocol.RequestAddCookies - Cookie [version: 0][name: SID][value: XXXXXXXX][domain: PGXSERVER.cern.ch][path: null][expiry: null] match [PGXSERVER.cern.ch:XXXX/core/graph/output-lurodrig_sub-graph_1/query]
1060671 [qtp1794568502-58] DEBUG org.apache.http.client.protocol.RequestAddCookies - Cookie [version: 0][name: _csrf_token][value: XXXXXXXX][domain: PGXSERVER.cern.ch][path: null][expiry: null] match [PGXSERVER.cern.ch:XXXX/core/graph/output-lurodrig_sub-graph_1/query]
1060671 [qtp1794568502-58] DEBUG org.apache.http.impl.conn.PoolingHttpClientConnectionManager - Connection request: [route: {}->http://PGXSERVER.cern.ch:XXXX][total kept alive: 1; route allocated: 1 of 2; total allocated: 1 of 20]
1060671 [qtp1794568502-58] DEBUG org.apache.http.impl.conn.PoolingHttpClientConnectionManager - Connection leased: [id: 2][route: {}->http://PGXSERVER.cern.ch:XXXX][total kept alive: 0; route allocated: 1 of 2; total allocated: 1 of 20]
1060671 [qtp1794568502-58] DEBUG org.apache.http.impl.execchain.MainClientExec - Stale connection check
1060672 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 << "[read] I/O error: Read timed out"
1060672 [qtp1794568502-58] DEBUG org.apache.http.impl.execchain.MainClientExec - Executing request POST /core/graph/output-lurodrig_sub-graph_1/query HTTP/1.1
1060672 [qtp1794568502-58] DEBUG org.apache.http.impl.execchain.MainClientExec - Target auth state: UNCHALLENGED
1060672 [qtp1794568502-58] DEBUG org.apache.http.impl.execchain.MainClientExec - Proxy auth state: UNCHALLENGED
1060672 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 >> POST /core/graph/output-lurodrig_sub-graph_1/query HTTP/1.1
1060672 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 >> Content-Length: 145
1060672 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 >> Content-Type: application/json; charset=UTF-8
1060672 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 >> Host: PGXSERVER.cern.ch:XXXX
1060672 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 >> Connection: Keep-Alive
1060672 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 >> User-Agent: Apache-HttpClient/4.3.6 (java 1.5)
1060672 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 >> Cookie: SID=XXXXXXXX; _csrf_token=XXXXXXXX
1060672 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 >> Cookie2: $Version=1
1060672 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 >> Accept-Encoding: gzip,deflate
1060672 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 >> "POST /core/graph/output-lurodrig_sub-graph_1/query HTTP/1.1[\r][\n]"
1060672 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 >> "Content-Length: 145[\r][\n]"
1060672 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 >> "Content-Type: application/json; charset=UTF-8[\r][\n]"
1060672 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 >> "Host: PGXSERVER.cern.ch:XXXX[\r][\n]"
1060672 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 >> "Connection: Keep-Alive[\r][\n]"
1060672 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 >> "User-Agent: Apache-HttpClient/4.3.6 (java 1.5)[\r][\n]"
1060672 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 >> "Cookie: SID=XXXXXXXX; _csrf_token=XXXXXXXX[\r][\n]"
1060672 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 >> "Cookie2: $Version=1[\r][\n]"
1060672 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 >> "Accept-Encoding: gzip,deflate[\r][\n]"
1060672 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 >> "[\r][\n]"
1060672 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 >> "{"pgqlQuery":"SELECT x WHERE (x WITH type='keyword' AND id() = 'electron')","semantic":null,"_csrf_token":"XXXXXXXX"}"
1060683 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 << "HTTP/1.1 405 Method Not Allowed[\r][\n]"
1060683 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 << "Server: Apache-Coyote/1.1[\r][\n]"
1060683 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 << "Content-Type: application/json;charset=utf-8[\r][\n]"
1060683 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 << "Content-Length: 62[\r][\n]"
1060683 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 << "Date: Tue, 12 Sep 2017 16:05:10 GMT[\r][\n]"
1060683 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 << "[\r][\n]"
1060683 [qtp1794568502-58] DEBUG org.apache.http.wire - http-outgoing-2 << "{"code":"bad_request","message":"HTTP 405 Method Not Allowed"}"
1060683 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 << HTTP/1.1 405 Method Not Allowed
1060683 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 << Server: Apache-Coyote/1.1
1060683 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 << Content-Type: application/json;charset=utf-8
1060683 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 << Content-Length: 62
1060683 [qtp1794568502-58] DEBUG org.apache.http.headers - http-outgoing-2 << Date: Tue, 12 Sep 2017 16:05:10 GMT
1060683 [qtp1794568502-58] DEBUG org.apache.http.impl.execchain.MainClientExec - Connection can be kept alive indefinitely
1060683 [qtp1794568502-58] DEBUG org.apache.http.impl.conn.PoolingHttpClientConnectionManager - Connection [id: 2][route: {}->http://PGXSERVER.cern.ch:XXXX] can be kept alive indefinitely
1060683 [qtp1794568502-58] DEBUG org.apache.http.impl.conn.PoolingHttpClientConnectionManager - Connection released: [id: 2][route: {}->http://PGXSERVER.cern.ch:XXXX][total kept alive: 1; route allocated: 1 of 2; total allocated: 1 of 20]
1060684 [qtp1794568502-58] DEBUG oracle.pgx.client.RemoteUtils - received HTTP status 405
1060684 [qtp1794568502-58] DEBUG oracle.pgx.client.RemoteUtils - {"code":"bad_request","message":"HTTP 405 Method Not Allowed"}
1060685 [qtp1794568502-58] DEBUG oracle.pgx.common.marshalers.ExceptionMarshaler - code: bad_request, message: HTTP 405 Method Not Allowed
1060687 [qtp1794568502-58] DEBUG oracle.pgx.api.PgxFuture - oracle.pgx.api.PgxFuture@322a9807[Completed exceptionally] completed exceptionally (cause IllegalArgumentException)
1060687 [qtp1794568502-58] DEBUG oracle.pgx.api.PgxFuture - oracle.pgx.api.PgxFuture@61a4a63f[Completed exceptionally] either already started or is done -> rollback
java.util.concurrent.ExecutionException: java.lang.IllegalArgumentException: HTTP 405 Method Not Allowed
at java.util.concurrent.CompletableFuture.reportGet(CompletableFuture.java:357)
at java.util.concurrent.CompletableFuture.get(CompletableFuture.java:1895)
at oracle.pgx.api.PgxFuture.get(PgxFuture.java:99)
at oracle.pgx.api.PgxGraph.queryPgql(PgxGraph.java:2883)
at ZenodoAddon.Graph.Pgx.PlainKeywordVertexFinder.find(PlainKeywordVertexFinder.scala:20)
at ZenodoAddon.Graph.Pgx.PlainKeywordVertexFinder.find(PlainKeywordVertexFinder.scala:10)
at ZenodoAddon.Graph.Pgx.DistanceKeywordProximityRanker.$anonfun$rank$1(DistanceKeywordProximityRanker.scala:30)
at scala.collection.immutable.List.map(List.scala:283)
at ZenodoAddon.Graph.Pgx.DistanceKeywordProximityRanker.rank(DistanceKeywordProximityRanker.scala:29)
at ZenodoAddon.Graph.Pgx.DistanceKeywordProximityRanker.rank(DistanceKeywordProximityRanker.scala:11)
at ZenodoAddon.Graph.Runner.$anonfun$query$3(Runner.scala:160)
at ZenodoAddon.Graph.QueryAddons.CacheAddon.unconditionalPipeline(CacheAddon.scala:172)
at ZenodoAddon.Graph.Runner.$anonfun$addonOverlayKeywordRecommendRequest$2(Runner.scala:91)
at ZenodoAddon.Graph.QueryAddons.CacheAddon.pipeline(CacheAddon.scala:148)
at ZenodoAddon.Graph.Runner.$anonfun$addonOverlayKeywordRecommendRequest$4(Runner.scala:102)
at scala.collection.LinearSeqOptimized.foldLeft(LinearSeqOptimized.scala:122)
at scala.collection.LinearSeqOptimized.foldLeft$(LinearSeqOptimized.scala:118)
at scala.collection.immutable.List.foldLeft(List.scala:86)
at ZenodoAddon.Graph.Runner.addonOverlayKeywordRecommendRequest(Runner.scala:98)
at ZenodoAddon.Graph.Runner.$anonfun$query$1(Runner.scala:155)
at scala.util.Try$.apply(Try.scala:209)
at ZenodoAddon.Graph.Runner.query(Runner.scala:112)
at ZenodoAddon.Main$.$anonfun$setupServer$14(Main.scala:91)
at scala.util.Success.flatMap(Try.scala:247)
at ZenodoAddon.Main$.recommendationHandler$1(Main.scala:91)
at ZenodoAddon.Main$.$anonfun$setupServer$15(Main.scala:117)
at spark.RouteImpl$1.handle(RouteImpl.java:72)
at spark.http.matching.Routes.execute(Routes.java:61)
at spark.http.matching.MatcherFilter.doFilter(MatcherFilter.java:130)
at spark.embeddedserver.jetty.JettyHandler.doHandle(JettyHandler.java:50)
at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1568)
at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)
at org.eclipse.jetty.server.Server.handle(Server.java:564)
at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:317)
at org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:251)
at org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:279)
at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:110)
at org.eclipse.jetty.io.ChannelEndPoint$2.run(ChannelEndPoint.java:124)
at org.eclipse.jetty.util.thread.Invocable.invokePreferred(Invocable.java:128)
at org.eclipse.jetty.util.thread.Invocable$InvocableExecutor.invoke(Invocable.java:222)
at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:294)
at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.produce(EatWhatYouKill.java:126)
at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:672)
at org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.java:590)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.lang.IllegalArgumentException: HTTP 405 Method Not Allowed
at oracle.pgx.common.marshalers.ExceptionMarshaler.toUnserializedException(ExceptionMarshaler.java:70)
at oracle.pgx.common.marshalers.ExceptionMarshaler.unmarshal(ExceptionMarshaler.java:102)
at oracle.pgx.client.RemoteUtils.parseExceptionalResponse(RemoteUtils.java:116)
at oracle.pgx.client.RemoteUtils.getResponseContent(RemoteUtils.java:81)
at oracle.pgx.client.RemoteUtils.parse(RemoteUtils.java:139)
at oracle.pgx.client.RemoteUtils.post(RemoteUtils.java:188)
at oracle.pgx.client.RemoteCoreImpl$73.request(RemoteCoreImpl.java:1833)
at oracle.pgx.client.RemoteCoreImpl$CoreRequest.request(RemoteCoreImpl.java:273)
at oracle.pgx.client.RemoteCoreImpl$CoreRequest.request(RemoteCoreImpl.java:264)
at oracle.pgx.client.AbstractFutureRequest.execute(AbstractFutureRequest.java:42)
at oracle.pgx.client.RemoteCoreImpl.request(RemoteCoreImpl.java:257)
at oracle.pgx.client.RemoteCoreImpl.queryPgql(RemoteCoreImpl.java:1820)
at oracle.pgx.api.PgxGraph.queryPgqlAsync(PgxGraph.java:1800)
at oracle.pgx.api.PgxGraph.queryPgqlAsync(PgxGraph.java:1812)
... 43 more
And in the server side:
12:05:10,431 DEBUG CsrfTokenValidator - received content type application/json; charset=UTF-8
12:05:10,441 INFO CoreEndpoint - clone graph id output-lurodrig with params {"nodePropNames":null,"edgePropNames":null,"newGraphName":null,"_csrf_token":"xxxxxxx"}
12:05:10,449 INFO Server - start task CLONE_GRAPH
12:05:10,449 DEBUG Task - submit CLONE_GRAPH to analysis-pool
12:05:10,450 DEBUG Task -xxxxxx START ====> CLONE_GRAPH
12:05:10,451 DEBUG Task - task CLONE_GRAPH acquires WRITE lock for session
12:05:10,454 DEBUG MutationManager - simplify graph output-lurodrig
12:05:10,458 DEBUG MutationManager$Mutation - update 2 node props and 0 edge props after mutation
12:05:10,485 DEBUG UnsafeDataStructureFactory - No unsafe array implementation for class java.lang.String. Using fallback java array.
12:05:10,487 DEBUG StringPool - Creating new String pool with policy: LimitedPoolingPolicy
12:05:10,501 DEBUG UnsafeDataStructureFactory - No unsafe array implementation for class java.lang.String. Using fallback java array.
12:05:10,502 DEBUG StringPool - Creating new String pool with policy: LimitedPoolingPolicy
12:05:10,666 DEBUG MutationManager$Mutation - adding new private graph output-lurodrig_sub-graph_1
12:05:10,666 DEBUG Task - task CLONE_GRAPH unlocks (WRITE) session
12:05:10,667 DEBUG Task - xxxxxxxx FINISHED => CLONE_GRAPH: total task exec time = 216 ms (0 secs)
12:05:10,684 DEBUG CsrfTokenValidator - received content type application/json; charset=UTF-8
12:05:10,688 DEBUG AbstractExceptionMapper - exception mapper caught exception
javax.ws.rs.NotAllowedException: HTTP 405 Method Not Allowed
at org.glassfish.jersey.server.internal.routing.MethodSelectingRouter.getMethodRouter(MethodSelectingRouter.java:514)
at org.glassfish.jersey.server.internal.routing.MethodSelectingRouter.access$300(MethodSelectingRouter.java:94)
at org.glassfish.jersey.server.internal.routing.MethodSelectingRouter$4.apply(MethodSelectingRouter.java:814)
at org.glassfish.jersey.server.internal.routing.MethodSelectingRouter.apply(MethodSelectingRouter.java:419)
at org.glassfish.jersey.server.internal.routing.RoutingStage._apply(RoutingStage.java:112)
at org.glassfish.jersey.server.internal.routing.RoutingStage._apply(RoutingStage.java:116)
at org.glassfish.jersey.server.internal.routing.RoutingStage._apply(RoutingStage.java:116)
at org.glassfish.jersey.server.internal.routing.RoutingStage._apply(RoutingStage.java:116)
at org.glassfish.jersey.server.internal.routing.RoutingStage.apply(RoutingStage.java:94)
at org.glassfish.jersey.server.internal.routing.RoutingStage.apply(RoutingStage.java:63)
at org.glassfish.jersey.process.internal.Stages.process(Stages.java:197)
at org.glassfish.jersey.server.ServerRuntime$2.run(ServerRuntime.java:295)
at org.glassfish.jersey.internal.Errors$1.call(Errors.java:271)
at org.glassfish.jersey.internal.Errors$1.call(Errors.java:267)
at org.glassfish.jersey.internal.Errors.process(Errors.java:315)
at org.glassfish.jersey.internal.Errors.process(Errors.java:297)
at org.glassfish.jersey.internal.Errors.process(Errors.java:267)
at org.glassfish.jersey.process.internal.RequestScope.runInScope(RequestScope.java:316)
at org.glassfish.jersey.server.ServerRuntime.process(ServerRuntime.java:286)
at org.glassfish.jersey.server.ApplicationHandler.handle(ApplicationHandler.java:1073)
at org.glassfish.jersey.servlet.WebComponent.service(WebComponent.java:377)
at org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:381)
at org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:344)
at org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:221)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:292)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:207)
at oracle.pgx.rest.filter.AbstractHttpFilter.doFilter(AbstractHttpFilter.java:44)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:240)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:207)
at oracle.pgx.rest.filter.AbstractHttpFilter.doFilter(AbstractHttpFilter.java:44)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:240)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:207)
at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:212)
at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:94)
at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:504)
at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:141)
at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:79)
at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:88)
at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:509)
at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1104)
at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:684)
at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1524)
at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.run(NioEndpoint.java:1480)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
at java.lang.Thread.run(Thread.java:745)
12:05:10,691 DEBUG AbstractExceptionMapper - mapped to IllegalArgumentException
java.lang.IllegalArgumentException: HTTP 405 Method Not Allowed
at oracle.pgx.common.marshalers.ExceptionMarshaler.toUnserializedException(ExceptionMarshaler.java:64)
at oracle.pgx.rest.mapper.AbstractWebApplicationExceptionMapper.mapException(AbstractWebApplicationExceptionMapper.java:32)
at oracle.pgx.rest.mapper.AbstractWebApplicationExceptionMapper.mapException(AbstractWebApplicationExceptionMapper.java:11)
at oracle.pgx.rest.mapper.AbstractExceptionMapper.toResponse(AbstractExceptionMapper.java:95)
at org.glassfish.jersey.server.ServerRuntime$Responder.mapException(ServerRuntime.java:569)
at org.glassfish.jersey.server.ServerRuntime$Responder.process(ServerRuntime.java:450)
at org.glassfish.jersey.server.ServerRuntime$2.run(ServerRuntime.java:311)
at org.glassfish.jersey.internal.Errors$1.call(Errors.java:271)
at org.glassfish.jersey.internal.Errors$1.call(Errors.java:267)
at org.glassfish.jersey.internal.Errors.process(Errors.java:315)
at org.glassfish.jersey.internal.Errors.process(Errors.java:297)
at org.glassfish.jersey.internal.Errors.process(Errors.java:267)
at org.glassfish.jersey.process.internal.RequestScope.runInScope(RequestScope.java:316)
at org.glassfish.jersey.server.ServerRuntime.process(ServerRuntime.java:286)
at org.glassfish.jersey.server.ApplicationHandler.handle(ApplicationHandler.java:1073)
at org.glassfish.jersey.servlet.WebComponent.service(WebComponent.java:377)
at org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:381)
at org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:344)
at org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:221)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:292)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:207)
at oracle.pgx.rest.filter.AbstractHttpFilter.doFilter(AbstractHttpFilter.java:44)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:240)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:207)
at oracle.pgx.rest.filter.AbstractHttpFilter.doFilter(AbstractHttpFilter.java:44)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:240)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:207)
at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:212)
at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:94)
at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:504)
at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:141)
at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:79)
at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:88)
at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:509)
at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1104)
at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:684)
at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1524)
at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.run(NioEndpoint.java:1480)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
at java.lang.Thread.run(Thread.java:745)
12:07:10,562 DEBUG Task - submit MEMORY_CLEANUP to server-thread
12:07:10,562 DEBUG Task - internal queue START ====> MEMORY_CLEANUP
12:07:10,562 DEBUG Task - internal queue FINISHED => MEMORY_CLEANUP: total task exec time = 0 ms (0 secs)
12:17:10,562 DEBUG Task - submit MEMORY_CLEANUP to server-thread
12:17:10,563 DEBUG Task - internal queue START ====> MEMORY_CLEANUP
12:17:10,563 DEBUG Task - internal queue FINISHED => MEMORY_CLEANUP: total task exec time = 0 ms (0 secs)
You can find the source code of our API here, BTW thank you very much Alastair Pagaras!
Are we missing something?
Thanks in advance,
Luis